STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW97633.1NTE family protein. (358 aa)    
Predicted Functional Partners:
SDW97667.1
H+/gluconate symporter.
 
     0.858
SDX67941.1
Type IV secretion system protein VirD4.
    
   0.747
SDW53317.1
Polyhydroxyalkanoate synthase.
 
   
 0.703
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
       0.624
SDX53500.1
3-hydroxybutyrate dehydrogenase.
  
  
  0.580
SDX46305.1
Cardiolipin synthase.
  
 
 0.569
SDX44974.1
Hypothetical protein.
     
 0.568
SDW92284.1
Long-chain acyl-CoA synthetase.
  
 
 0.548
SDW53407.1
Polyhydroxyalkanoate synthesis repressor PhaR.
 
     0.543
SDW24696.1
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.525
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.