STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX09626.1Tripartite-type tricarboxylate transporter, receptor component TctC. (318 aa)    
Predicted Functional Partners:
SDX09659.1
Putative tricarboxylic transport membrane protein.
 
    0.922
SDW49573.1
Putative tricarboxylic transport membrane protein.
  
    0.826
SDW44118.1
Putative tricarboxylic transport membrane protein.
  
    0.826
SDW44432.1
TctA family transporter.
  
    0.826
SDW44737.1
TctA family transporter.
  
    0.826
SDW74326.1
TctA family transporter.
  
    0.826
SDW75146.1
TctA family transporter.
  
    0.826
SDW67789.1
TctA family transporter.
  
    0.826
SDX29124.1
Putative tricarboxylic transport membrane protein.
  
    0.826
SDX29814.1
Putative tricarboxylic transport membrane protein.
  
    0.826
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.