STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX12016.1D-xylose transport system ATP-binding protein. (241 aa)    
Predicted Functional Partners:
SDX12094.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  0.916
SDX11983.1
D-ribose pyranase; Belongs to the RbsD / FucU family.
  
  
 0.861
SDW65993.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.830
SDW65681.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.816
SDW65650.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  0.806
SDW66211.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.802
SDX06709.1
Multiple monosaccharide ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.782
SDX88593.1
Mannose ABC transporter membrane protein/fructose ABC transporter membrane protein/ribose ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.781
SDX09180.1
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-); Belongs to the binding-protein-dependent transport system permease family.
 
  0.754
SDX46094.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.715
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.