STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX12056.1Monosaccharide ABC transporter substrate-binding protein, CUT2 family. (378 aa)    
Predicted Functional Partners:
SDX08417.1
Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
   
 0.994
SDW49827.1
GAF sensor hybrid histidine kinase.
   
 0.988
SDW42490.1
Signal transduction histidine kinase.
   
 0.988
SDX25049.1
PAS domain S-box-containing protein.
   
 0.988
SDX10958.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
   
 0.982
SDW47181.1
CHASE4 domain-containing protein.
   
 0.979
SDW55549.1
Signal transduction histidine kinase.
    
 0.961
SDX11983.1
D-ribose pyranase; Belongs to the RbsD / FucU family.
 
  
 0.894
SDX12094.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  0.806
SDX12016.1
D-xylose transport system ATP-binding protein.
  
  0.708
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.