STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX14364.1Transcriptional regulator, GntR family. (234 aa)    
Predicted Functional Partners:
SDX14137.1
Fructuronate reductase; Belongs to the mannitol dehydrogenase family.
     0.849
SDX14397.1
2-dehydro-3-deoxygluconokinase.
 
     0.827
SDX64352.1
Transcriptional regulator, GntR family.
  
     0.771
SDX12385.1
DNA-binding transcriptional regulator, GntR family.
  
     0.762
uxaC
Glucuronate isomerase.
 
   
 0.756
SDX08928.1
Transcriptional regulator, GntR family.
  
     0.753
SDW68760.1
DNA-binding transcriptional regulator, GntR family.
  
     0.733
SDX51347.1
Transcriptional regulator, GntR family.
  
     0.714
SDX11127.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
    0.643
SDX07852.1
DNA-binding transcriptional regulator, FadR family.
  
    0.624
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.