STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX06584.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (305 aa)    
Predicted Functional Partners:
SDW66848.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.748
SDX12736.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.696
SDX48964.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.682
SDX06780.1
D-galactose 1-dehydrogenase.
 
     0.664
SDX29934.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.663
SDW45005.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.632
SDW42847.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.627
SDX06613.1
Multiple monosaccharide-binding protein.
 
     0.612
SDX65067.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.575
SDX06808.1
Dihydrodipicolinate synthetase family protein; Belongs to the DapA family.
 
     0.556
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.