STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX23019.1Transcriptional regulator, BadM/Rrf2 family. (163 aa)    
Predicted Functional Partners:
SDX62322.1
Cysteine desulfurase.
  
 
 0.832
SDX23046.1
Long-chain acyl-CoA synthetase.
       0.502
SDX53466.1
NifU homolog involved in Fe-S cluster formation.
  
  
 0.495
SDW20752.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
    0.488
SDW20679.1
Cytochrome c oxidase cbb3-type subunit 4.
  
    0.475
SDX19085.1
Transcriptional regulator, BadM/Rrf2 family.
  
   
 0.425
SDW20596.1
Cytochrome c oxidase accessory protein FixG.
  
  
 0.418
SDW20716.1
Cytochrome c oxidase cbb3-type subunit 2.
  
    0.411
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.