STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX21593.1Putative quinone oxidoreductase, YhdH/YhfP family. (329 aa)    
Predicted Functional Partners:
SDW24382.1
Acyl transferase domain-containing protein.
  
 0.944
SDW44908.1
Phosphate acetyltransferase.
  
 0.894
SDX51709.1
Citrate synthase; Belongs to the citrate synthase family.
    
 0.883
SDX40502.1
Methylmalonate-semialdehyde dehydrogenase [acylating].
   
  0.881
SDX21739.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
  0.876
SDX49803.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.803
SDW18254.1
Aldehyde dehydrogenase (NAD+).
   
  0.791
SDX64548.1
Aldehyde dehydrogenase (NAD+).
   
  0.791
SDW28599.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.774
SDX34932.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.774
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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