STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX29757.13-hydroxyisobutyrate dehydrogenase. (290 aa)    
Predicted Functional Partners:
SDX29906.1
3-hydroxyisobutyrate dehydrogenase.
  
  
  0.904
SDX40502.1
Methylmalonate-semialdehyde dehydrogenase [acylating].
 
 
  0.850
SDX29727.1
Predicted dehydrogenase.
       0.773
SDX51709.1
Citrate synthase; Belongs to the citrate synthase family.
  
 
  0.758
SDW49638.1
2-hydroxy-3-oxopropionate reductase.
  
  
 
0.710
SDX52791.1
3-hydroxyisobutyrate dehydrogenase.
  
  
 
0.706
SDW72531.1
Biotin carboxyl carrier protein /biotin carboxylase.
  
 
  0.676
SDX19737.1
3-methylcrotonoyl-CoA carboxylase, alpha subunit.
  
 
  0.676
SDX49803.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.666
SDW76239.1
Hydroxypyruvate reductase.
 
  
  0.654
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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