STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX43892.1Maltose-binding protein /trehalose-binding protein /sucrose-binding protein. (451 aa)    
Predicted Functional Partners:
SDX43833.1
Maltose ABC transporter membrane protein/trehalose ABC transporter membrane protein/sucrose ABC transporter membrane protein.
 
  0.977
SDX43871.1
Maltose ABC transporter membrane protein.
 
 0.966
SDX43770.1
Maltose ABC transporter ATP-binding protein/trehalose ABC transporter ATP-binding protein/sucrose ABC transporter ATP-binding protein.
 
  0.857
SDW95223.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
  
  0.818
SDX08270.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
  
  0.818
SDX59526.1
Alpha-1,4-digalacturonate transport system permease protein.
  
  0.818
SDX43803.1
Alpha-glucosidase.
 
    0.812
SDX43931.1
Transcriptional regulator, LacI family.
 
     0.766
SDX43966.1
Beta-glucosidase.
 
     0.755
SDW14959.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
   
 0.724
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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