STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX40776.1Capsular polysaccharide transport system permease protein. (668 aa)    
Predicted Functional Partners:
SDX40811.1
Capsular polysaccharide transport system ATP-binding protein.
 
 
 0.997
SDX82000.1
Capsular polysaccharide transport system ATP-binding protein.
 
 
 0.988
SDX82049.1
Capsular polysaccharide transport system permease protein.
 
 
 0.988
SDX62785.1
Capsule polysaccharide biosynthesis protein.
 
  
 0.961
SDW17476.1
ABC-type polysaccharide/polyol phosphate export permease.
 
 
 0.944
SDX62742.1
Polysaccharide export outer membrane protein.
 
  
 0.927
SDX56552.1
Polysaccharide export outer membrane protein.
 
  
 0.909
SDX82022.1
Capsular polysaccharide transport system permease protein.
 
  
 
0.904
SDW49410.1
Hypothetical protein.
  
    0.881
SDX41921.1
ABC-2 type transport system ATP-binding protein.
    
  0.868
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.