STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX86098.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
SDX97770.1
Hypothetical protein.
 
     0.788
SDX80640.1
Hypothetical protein.
 
     0.787
SDX83780.1
Hypothetical protein.
 
     0.786
SDX86146.1
Hypothetical protein.
 
     0.785
SDX83751.1
Hypothetical protein.
 
     0.779
SDX86172.1
Hypothetical protein.
 
     0.779
SDX89298.1
Hypothetical protein.
 
     0.779
SDX83723.1
Hypothetical protein.
 
     0.776
SDX86197.1
Hypothetical protein.
 
     0.776
SDX89268.1
Hypothetical protein.
 
     0.776
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.