Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW42490.1 | SDW47181.1 | SAMN04488238_10237 | SAMN04488238_102170 | Signal transduction histidine kinase. | CHASE4 domain-containing protein. | 0.999 |
SDW42490.1 | SDW49827.1 | SAMN04488238_10237 | SAMN04488238_102244 | Signal transduction histidine kinase. | GAF sensor hybrid histidine kinase. | 0.999 |
SDW42490.1 | SDW55549.1 | SAMN04488238_10237 | SAMN04488238_102385 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SDW42490.1 | SDX08417.1 | SAMN04488238_10237 | SAMN04488238_105129 | Signal transduction histidine kinase. | Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
SDW42490.1 | SDX10958.1 | SAMN04488238_10237 | SAMN04488238_105206 | Signal transduction histidine kinase. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.999 |
SDW42490.1 | SDX25049.1 | SAMN04488238_10237 | SAMN04488238_106218 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SDW42490.1 | SDX32656.1 | SAMN04488238_10237 | SAMN04488238_107118 | Signal transduction histidine kinase. | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | 0.999 |
SDW42490.1 | SDX32686.1 | SAMN04488238_10237 | SAMN04488238_107119 | Signal transduction histidine kinase. | Methyl-accepting chemotaxis protein. | 0.999 |
SDW42490.1 | SDX86834.1 | SAMN04488238_10237 | SAMN04488238_1337 | Signal transduction histidine kinase. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.999 |
SDW42490.1 | SDX87849.1 | SAMN04488238_10237 | SAMN04488238_1354 | Signal transduction histidine kinase. | Hypothetical protein. | 0.997 |
SDW47181.1 | SDW42490.1 | SAMN04488238_102170 | SAMN04488238_10237 | CHASE4 domain-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDW47181.1 | SDW49827.1 | SAMN04488238_102170 | SAMN04488238_102244 | CHASE4 domain-containing protein. | GAF sensor hybrid histidine kinase. | 0.999 |
SDW47181.1 | SDW55549.1 | SAMN04488238_102170 | SAMN04488238_102385 | CHASE4 domain-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDW47181.1 | SDX08417.1 | SAMN04488238_102170 | SAMN04488238_105129 | CHASE4 domain-containing protein. | Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
SDW47181.1 | SDX10958.1 | SAMN04488238_102170 | SAMN04488238_105206 | CHASE4 domain-containing protein. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.999 |
SDW47181.1 | SDX25049.1 | SAMN04488238_102170 | SAMN04488238_106218 | CHASE4 domain-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SDW47181.1 | SDX32656.1 | SAMN04488238_102170 | SAMN04488238_107118 | CHASE4 domain-containing protein. | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | 0.998 |
SDW47181.1 | SDX32686.1 | SAMN04488238_102170 | SAMN04488238_107119 | CHASE4 domain-containing protein. | Methyl-accepting chemotaxis protein. | 0.999 |
SDW47181.1 | SDX86834.1 | SAMN04488238_102170 | SAMN04488238_1337 | CHASE4 domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.998 |
SDW47181.1 | SDX87849.1 | SAMN04488238_102170 | SAMN04488238_1354 | CHASE4 domain-containing protein. | Hypothetical protein. | 0.988 |
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