STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA05544.1Triacylglycerol lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)    
Predicted Functional Partners:
ORA05426.1
Thymidylate kinase; Catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.709
ORA04619.1
Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.585
ORA02764.1
Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.585
ORA06474.1
Diacylglycerol kinase; Involved in the biosynthesis of phosphatidylinositol mannosides (PIMs); the enzyme from Mycobacterium tuberculosis can phosphorylate a variety of amphipathic lipids; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.574
ORA05400.1
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.457
ORA04543.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.453
ORA05427.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.452
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.452
gcvP
Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
    0.434
ORA03349.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.403
Your Current Organism:
Mycolicibacterium bacteremicum
NCBI taxonomy Id: 564198
Other names: ATCC 25791, DSM 45578, M. bacteremicum, Mycobacterium bacteremicum, Mycobacterium bacteremicum Brown-Elliott et al. 2012, Mycobacterium sp. AR-01, Mycobacterium sp. AR-04, Mycobacterium sp. AR-08, Mycobacterium sp. AR-19, Mycobacterium sp. AR-25, Mycobacterium sp. ATCC 25791, Mycobacterium sp. MO-2218, Mycobacterium sp. MO-2842, Mycobacterium sp. MO-2886, Mycolicibacterium bacteremicum (Brown-Elliott et al. 2012) Gupta et al. 2018
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