STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA01814.1acyl-CoA thioesterase II; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)    
Predicted Functional Partners:
ORA01813.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyruvate kinase family.
  
    0.799
ORA03691.1
acyl-CoA thioesterase II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.766
ORA02230.1
acyl-CoA thioesterase II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.746
ORA03650.1
acyl-CoA thioesterase II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.734
ORA05207.1
NAD-glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.657
ORA01811.1
Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.632
gltD-2
Glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.599
ORA01871.1
Acid resistance periplasmic serine protease MarP; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.535
ORA01831.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.496
ORA02932.1
Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.469
Your Current Organism:
Mycolicibacterium bacteremicum
NCBI taxonomy Id: 564198
Other names: ATCC 25791, DSM 45578, M. bacteremicum, Mycobacterium bacteremicum, Mycobacterium bacteremicum Brown-Elliott et al. 2012, Mycobacterium sp. AR-01, Mycobacterium sp. AR-04, Mycobacterium sp. AR-08, Mycobacterium sp. AR-19, Mycobacterium sp. AR-25, Mycobacterium sp. ATCC 25791, Mycobacterium sp. MO-2218, Mycobacterium sp. MO-2842, Mycobacterium sp. MO-2886, Mycolicibacterium bacteremicum (Brown-Elliott et al. 2012) Gupta et al. 2018
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