STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWB93_22625FAD-dependent oxidoreductase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)    
Predicted Functional Partners:
ORV00174.1
Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.818
ORV00175.1
Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.737
ORU99163.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.648
ORU97637.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.550
ORU97635.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.540
ORU97636.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.528
ORU97639.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.528
ORU97724.1
HNH nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.524
ORU95542.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.496
ORV00719.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.469
Your Current Organism:
Mycobacterium bohemicum
NCBI taxonomy Id: 56425
Other names: CIP 105808, CIP 105811, DSM 44277, JCM 12402, M. bohemicum
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