STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORU95896.1acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (543 aa)    
Predicted Functional Partners:
ORU95895.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.896
ORU95893.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.895
ORU96011.1
enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.884
ORU96010.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.882
ORU95894.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.879
ORV00486.1
Fatty acyl-AMP ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.878
ORV00730.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.861
ORV00545.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.861
ORU95716.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.861
ORU97772.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.830
Your Current Organism:
Mycobacterium bohemicum
NCBI taxonomy Id: 56425
Other names: CIP 105808, CIP 105811, DSM 44277, JCM 12402, M. bohemicum
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