STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060S2L1Epimerase domain-containing protein. (371 aa)    
Predicted Functional Partners:
A0A060SM31
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.867
A0A060SGP7
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
  0.865
A0A060SAJ3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.863
A0A060SPM3
Ribosomal_S10 domain-containing protein.
   
  0.863
A0A060S3H6
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.862
A0A060S7Y4
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
  0.862
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.862
A0A060SNZ7
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.861
A0A060SUW5
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.860
A0A060SS08
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
  0.852
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.