STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060S2Z9Uncharacterized protein. (347 aa)    
Predicted Functional Partners:
A0A060SI58
EGF-like domain-containing protein.
    
 0.803
A0A060S6G8
Uncharacterized protein.
    
  0.755
A0A060S364
Uncharacterized protein.
    
 0.696
A0A060S4A4
Uncharacterized protein.
    
  0.683
A0A060S9M6
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.655
A0A060SDD5
Uncharacterized protein.
    
   0.653
A0A060S961
Uncharacterized protein.
    
   0.625
A0A060SPJ9
Uncharacterized protein.
 
     0.613
A0A060SAY6
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
  0.606
A0A060SS70
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
  0.606
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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