STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060S5N6Uncharacterized protein. (298 aa)    
Predicted Functional Partners:
A0A060SA30
Uncharacterized protein.
   
 
 0.996
A0A060SB68
Uncharacterized protein.
   
 
 0.996
A0A060SFE2
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.996
A0A060SP64
Uncharacterized protein.
   
 
 0.996
A0A060SSQ2
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.996
A0A060S3N0
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.995
A0A060SGH4
Uncharacterized protein.
   
 
 0.995
A0A060STQ1
Ribosomal_L30 domain-containing protein.
   
   0.994
A0A060SEK7
Uncharacterized protein.
   
 
 0.993
A0A060SGC6
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.993
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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