STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060S9B1Pkinase_fungal domain-containing protein. (411 aa)    
Predicted Functional Partners:
A0A060SF60
Uncharacterized protein.
    
 0.861
A0A060SI87
Uncharacterized protein.
    
 0.826
A0A060SVW0
RIO domain-containing protein.
    
 0.820
A0A060S3G7
Bms1-type G domain-containing protein.
    
 0.778
A0A060SGX2
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
    
 0.754
A0A060SAJ3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 0.737
A0A060SGG6
Photolyase/cryptochrome alpha/beta domain-containing protein.
    
 0.730
A0A060SUW5
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.725
A0A060SIM1
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
  0.721
A0A060SPM3
Ribosomal_S10 domain-containing protein.
    
 0.705
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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