STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060S9C1Uncharacterized protein. (1391 aa)    
Predicted Functional Partners:
A0A060SQS4
Uncharacterized protein.
    
 0.998
A0A060SKE2
Uncharacterized protein.
    
 0.997
A0A060S1V1
Uncharacterized protein.
    
 0.995
A0A060SA25
Endo/exonuclease/phosphatase domain-containing protein.
    
 0.992
A0A060SCH1
NOT2_3_5 domain-containing protein.
    
 0.990
A0A060SPD0
Uncharacterized protein.
   
 0.988
A0A060SQ44
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.974
A0A060SGL8
Uncharacterized protein.
    
 
 0.962
A0A060S4D9
Uncharacterized protein.
    
 
 0.946
A0A060SRP1
Protein kinase domain-containing protein.
    
 
 0.940
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.