STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SAL540S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (138 aa)    
Predicted Functional Partners:
A0A060S3H6
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.999
A0A060S6I2
Uncharacterized protein.
  
 
 0.999
A0A060S6V7
Ribosomal_L7Ae domain-containing protein.
  
 0.999
A0A060S739
40S ribosomal protein S27.
   
 0.999
A0A060S7Y4
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.999
A0A060S8F1
Ribos_L4_asso_C domain-containing protein.
   
 0.999
A0A060S9I2
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
  
 0.999
A0A060SA14
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 0.999
A0A060SAJ3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.999
A0A060SBK4
Ubiquitin-like domain-containing protein.
   
 0.999
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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