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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SAM0Methyltransf_12 domain-containing protein. (322 aa)    
Predicted Functional Partners:
A0A060S3G7
Bms1-type G domain-containing protein.
   
  0.732
A0A060SQC1
Uncharacterized protein.
   
 0.726
A0A060SDS2
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.717
A0A060SIM1
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.717
A0A060SAL5
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.715
A0A060S2X4
Uncharacterized protein.
   
 0.714
A0A060SCM3
Uncharacterized protein.
   
 0.714
A0A060S739
40S ribosomal protein S27.
    
  0.709
A0A060SI87
Uncharacterized protein.
   
 0.705
A0A060S3H6
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.704
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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