Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SC40Uncharacterized protein. (125 aa)    
Predicted Functional Partners:
A0A060SA04
Uncharacterized protein.
   
 0.998
A0A060S5I4
Uncharacterized protein.
   
 
 0.990
A0A060SNP0
Uncharacterized protein.
   
 
 0.988
A0A060SZR6
Uncharacterized protein.
   
 
 0.987
A0A060SA17
ATP-synt_DE_N domain-containing protein.
   
 
 0.972
A0A060SD82
Uncharacterized protein.
   
 
 0.965
A0A060SLD4
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.965
A0A060S709
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.957
A0A060S8C6
Uncharacterized protein.
   
 
 0.955
A0A060SFX1
Uncharacterized protein.
   
 
 0.935
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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