close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SC48ABC transporter domain-containing protein. (682 aa)    
Predicted Functional Partners:
A0A060SI17
Uncharacterized protein.
   
 0.743
A0A060SM78
Uncharacterized protein.
    
 0.687
A0A060SP23
Uncharacterized protein; Belongs to the peptidase M16 family.
   
 0.660
A0A060SG12
MPN domain-containing protein.
    
  0.654
A0A060SVX1
Uncharacterized protein.
   
 0.630
A0A060S2T5
Ubiquitin carboxyl-terminal hydrolase.
    
  0.628
A0A060SJZ2
AAA domain-containing protein.
   
  0.615
A0A060SKG4
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
  0.613
A0A060SVH3
Uncharacterized protein.
   
 0.610
A0A060SXL9
Uncharacterized protein.
   
 0.610
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.