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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SC69Uncharacterized protein. (545 aa)    
Predicted Functional Partners:
A0A060S968
Uncharacterized protein.
    
 0.936
A0A060SD49
Chromo domain-containing protein.
  
 0.921
A0A060SM14
Chromo domain-containing protein.
   
 0.904
A0A060SCE8
Histone H2A; Belongs to the histone H2A family.
   
 0.897
A0A060SNW1
Uncharacterized protein.
   
 
 0.894
A0A060SFG4
WD_REPEATS_REGION domain-containing protein.
   
 0.881
A0A060S3S1
Uncharacterized protein.
   
 0.877
A0A060SQT8
Uncharacterized protein.
   
 0.873
A0A060SK55
Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.
   
 0.870
A0A060SRK9
Uncharacterized protein.
   
 0.869
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.