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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SC80Uncharacterized protein. (714 aa)    
Predicted Functional Partners:
A0A060SUA2
Spindle pole body component.
   
 0.963
A0A060S3L9
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.960
A0A060SFB9
Spindle pole body component.
   
 0.951
A0A060SN41
Spindle pole body component.
    
 0.950
A0A060SKK8
Uncharacterized protein.
    
 0.945
A0A060ST17
Uncharacterized protein.
    
  0.903
A0A060SQR8
Uncharacterized protein; Belongs to the actin family.
   
   0.862
A0A060SXZ6
CFEM domain-containing protein.
   
 
 0.819
A0A060SSE6
Uncharacterized protein.
    
 0.773
A0A060S6Y8
Uncharacterized protein.
    
 0.746
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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