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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SC83Aminotran_1_2 domain-containing protein. (529 aa)    
Predicted Functional Partners:
A0A060SBA8
Uncharacterized protein.
  
0.996
A0A060SBA5
Uncharacterized protein.
    
 
 0.939
A0A060SAA5
Uncharacterized protein.
     
 0.880
A0A060T0H5
Uncharacterized protein.
     
 0.880
A0A060S6Z2
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.867
A0A060STC0
Tryptophan synthase.
    
 0.867
A0A060SAA8
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.832
A0A060STS5
Aminotran_5 domain-containing protein.
    
 0.806
A0A060S9S2
Threonine dehydratase.
    
 0.796
A0A060SS31
PALP domain-containing protein.
    
 0.796
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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