STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SC91Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (311 aa)    
Predicted Functional Partners:
A0A060SHP9
Uncharacterized protein.
   
 0.734
A0A060SDM6
Uncharacterized protein.
   
0.732
A0A060SBZ2
FSH1 domain-containing protein.
   
 
 0.702
A0A060S8Z4
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.685
A0A060SQI2
Pex14_N domain-containing protein.
    
  0.675
A0A060SBK4
Ubiquitin-like domain-containing protein.
    
  0.674
A0A060S328
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
  0.670
A0A060S8A5
TPR_REGION domain-containing protein.
   
  0.648
A0A060SE56
TPR_REGION domain-containing protein.
   
  0.648
A0A060ST42
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.628
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.