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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SC98Uncharacterized protein. (461 aa)    
Predicted Functional Partners:
A0A060SCW5
Uncharacterized protein.
   
  0.802
A0A060SG38
SF3b1 domain-containing protein.
   
 
 0.733
A0A060S691
TPR_REGION domain-containing protein.
    
 
 0.730
A0A060SE84
Pinin_SDK_memA domain-containing protein.
   
  0.716
A0A060SK84
C2H2-type domain-containing protein.
   
  0.684
A0A060SFY0
Tr-type G domain-containing protein.
    
 
 0.675
A0A060SFW8
Uncharacterized protein.
   
  0.674
A0A060SGJ4
Uncharacterized protein.
   
  0.674
A0A060SLZ6
Uncharacterized protein.
   
  0.674
A0A060SNR7
Distantly related to plant expansins.
   
  0.674
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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