STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SCV9AA_permease domain-containing protein. (600 aa)    
Predicted Functional Partners:
A0A060SQQ5
Fe2OG dioxygenase domain-containing protein.
   
 0.676
A0A060S4C0
Glycoside Hydrolase Family 13 protein.
   
 0.654
A0A060SQ72
Glycoside Hydrolase Family 13 / Glycosyltransferase Family 5 protein.
   
 0.654
A0A060SQR9
Glycoside Hydrolase Family 13 protein.
   
 0.654
A0A060STJ2
Glycoside Hydrolase Family 13 protein.
   
 0.654
A0A060SUI6
Uncharacterized protein.
   
 0.654
A0A060S3R1
Alpha-amylase.
    
 0.652
A0A060S1T8
Uncharacterized protein.
    
 0.578
A0A060S6X8
Uncharacterized protein.
    
 0.578
A0A060SC53
Uncharacterized protein.
    
 0.578
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.