STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SEP2Uncharacterized protein. (285 aa)    
Predicted Functional Partners:
A0A060S5N6
Uncharacterized protein.
   
 
 0.900
A0A060S3L4
Nudix hydrolase domain-containing protein.
   
   0.891
A0A060SEK2
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
   0.890
A0A060SML5
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
   0.873
A0A060SP64
Uncharacterized protein.
   
 
 0.867
A0A060ST58
Uncharacterized protein.
   
 
 0.867
A0A060SBB4
Uncharacterized protein.
   
 
 0.862
A0A060SB68
Uncharacterized protein.
   
 
 0.860
A0A060SMS7
Uncharacterized protein.
   
 
 0.856
A0A060S3N0
Ribosomal_L18e/L15P domain-containing protein.
   
   0.855
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.