STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SFL6Uncharacterized protein. (443 aa)    
Predicted Functional Partners:
A0A060SPL8
Uncharacterized protein.
   
 0.890
A0A060SI58
EGF-like domain-containing protein.
   
 0.583
A0A060SMV6
SKIP_SNW domain-containing protein.
    
  0.579
A0A060SG12
MPN domain-containing protein.
    
  0.553
A0A060SH32
Uncharacterized protein.
    
  0.548
A0A060SSE1
Uncharacterized protein.
    
  0.548
A0A060S4T8
Uncharacterized protein.
    
  0.541
A0A060SHW9
Uncharacterized protein.
    
  0.536
A0A060SYS8
Uncharacterized protein.
   
  0.516
A0A060SIT5
WD_REPEATS_REGION domain-containing protein.
    
  0.508
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.