STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SFM0CSTF_C domain-containing protein. (135 aa)    
Predicted Functional Partners:
A0A060SPA2
Uncharacterized protein.
   
 0.997
A0A060SVE9
Uncharacterized protein.
   
 0.991
A0A060S9W2
CPSF_A domain-containing protein.
   
 0.990
A0A060SGF0
CID domain-containing protein.
    
 0.989
A0A060SAN3
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.988
A0A060SQJ2
Uncharacterized protein.
   
 0.988
A0A060SGI7
Uncharacterized protein.
   
 0.987
A0A060SLW7
Uncharacterized protein.
   
 0.981
A0A060SLV6
Fip1 domain-containing protein.
   
 0.980
A0A060SHJ4
WD_REPEATS_REGION domain-containing protein.
    
 0.979
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.