A0A060SG37 protein (Trametes cinnabarina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A060SG37

Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (132 aa)

Predicted Functional Partners:

A0A060SIS8

0.865

A0A060SCJ2

0.843

A0A060SKY6

0.843

A0A060SM97

0.843

A0A060S205

0.795

A0A060SAP3

0.795

A0A060SP36

0.795

A0A060S2T8

0.760

A0A060SBQ9

0.698

A0A060SGI2

0.677

Your Current Organism:

Trametes cinnabarina

NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A060S205	A0A060S2T8	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.794
A0A060S205	A0A060SAP3	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.952
A0A060S205	A0A060SBQ9	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.939
A0A060S205	A0A060SG37	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.795
A0A060S205	A0A060SGI2	Uncharacterized protein.	Uncharacterized protein.	0.794
A0A060S205	A0A060SIS8	Uncharacterized protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.794
A0A060S205	A0A060SP36	Uncharacterized protein.	Uncharacterized protein.	0.952
A0A060S2T8	A0A060S205	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.794
A0A060S2T8	A0A060SAP3	FAD-binding FR-type domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein.	0.794
A0A060S2T8	A0A060SBQ9	FAD-binding FR-type domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein.	0.591
A0A060S2T8	A0A060SG37	FAD-binding FR-type domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.760
A0A060S2T8	A0A060SIS8	FAD-binding FR-type domain-containing protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.788
A0A060S2T8	A0A060SP36	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.794
A0A060SAP3	A0A060S205	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein.	0.952
A0A060SAP3	A0A060S2T8	Cytochrome b5 heme-binding domain-containing protein.	FAD-binding FR-type domain-containing protein.	0.794
A0A060SAP3	A0A060SBQ9	Cytochrome b5 heme-binding domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein.	0.939
A0A060SAP3	A0A060SG37	Cytochrome b5 heme-binding domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.795
A0A060SAP3	A0A060SGI2	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein.	0.794
A0A060SAP3	A0A060SIS8	Cytochrome b5 heme-binding domain-containing protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.794
A0A060SAP3	A0A060SP36	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein.	0.952