STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SHT2Reverse transcriptase domain-containing protein. (1024 aa)    
Predicted Functional Partners:
A0A060SA50
Ubiquitin-like domain-containing protein.
    
  0.667
A0A060SBK4
Ubiquitin-like domain-containing protein.
    
  0.667
A0A060SG12
MPN domain-containing protein.
    
  0.666
A0A060T168
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.657
A0A060SJ45
Uncharacterized protein.
   
   0.643
A0A060SEW6
Uncharacterized protein.
    
  0.640
A0A060SKH0
Uncharacterized protein.
    
  0.640
A0A060S3G1
Uncharacterized protein.
    
 0.626
A0A060SLX2
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.606
A0A060SGW1
Ubiquitin-like domain-containing protein.
    
  0.596
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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