STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SI63Uncharacterized protein. (261 aa)    
Predicted Functional Partners:
A0A060SPL8
Uncharacterized protein.
   
 0.956
A0A060S2D6
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.806
A0A060SPG3
RGS domain-containing protein.
   
 0.775
A0A060S7K7
HSF_DOMAIN domain-containing protein.
   
 0.771
A0A060SEZ1
Uncharacterized protein.
    
 0.771
A0A060SAH9
Uncharacterized protein.
    
 0.766
A0A060SAY6
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
 0.740
A0A060SS70
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
 0.740
A0A060S7I7
Uncharacterized protein.
    
  0.728
A0A060S522
Uncharacterized protein.
    
 0.710
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.