Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SIM2Uncharacterized protein; Belongs to the TPP enzyme family. (545 aa)    
Predicted Functional Partners:
A0A060SAE0
ACT domain-containing protein.
  
 0.985
A0A060SAU1
Uncharacterized protein.
   
 
 0.859
A0A060SN53
Uncharacterized protein; Belongs to the TPP enzyme family.
     
  0.804
A0A060SNM7
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.776
A0A060S2K7
HECT domain-containing protein.
    
   0.756
A0A060SD39
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.739
A0A060SDS9
Uncharacterized protein.
  
 0.739
A0A060SF90
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.738
A0A060STS5
Aminotran_5 domain-containing protein.
  
 
 0.734
A0A060SGD8
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.731
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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