STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SJS2Uncharacterized protein. (547 aa)    
Predicted Functional Partners:
A0A060S3N6
Uncharacterized protein.
    
  0.512
A0A060SDQ0
Uncharacterized protein.
    
  0.512
A0A060SE71
Uncharacterized protein.
    
  0.512
A0A060SLC7
Uncharacterized protein.
    
  0.512
A0A060SLW0
Uncharacterized protein.
    
  0.512
A0A060SN63
Uncharacterized protein.
    
  0.512
A0A060SQI0
Uncharacterized protein.
    
  0.512
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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