STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SKB5AAA_12 domain-containing protein. (780 aa)    
Predicted Functional Partners:
A0A060S7W4
Uncharacterized protein.
   
 0.941
A0A060S871
Smg4_UPF3 domain-containing protein.
    
 0.933
A0A060SGG8
EST1_DNA_bind domain-containing protein.
    
 0.889
A0A060SBI1
RRM domain-containing protein.
    
 0.862
A0A060ST40
Uncharacterized protein.
    
 0.854
A0A060SP54
RRM domain-containing protein.
    
 0.829
A0A060SP03
Uncharacterized protein.
    
 0.813
A0A060S6Z2
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.810
A0A060SLS7
3'-5' exonuclease domain-containing protein.
    
 0.810
A0A060SWD7
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.801
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.