STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SLP3Uncharacterized protein; Belongs to the OSBP family. (561 aa)    
Predicted Functional Partners:
A0A060SBT5
Uncharacterized protein; Belongs to the OSBP family.
   
 0.691
A0A060SLJ6
NIPSNAP domain-containing protein.
   
  0.661
A0A060S3N6
Uncharacterized protein.
    
  0.646
A0A060SLW0
Uncharacterized protein.
    
  0.646
A0A060SAG7
SSD domain-containing protein.
   
 0.644
A0A060SJL1
Uncharacterized protein.
    
  0.641
A0A060SB47
Auxilliary Activities Family 9 protein.
    
  0.609
A0A060SRF1
Uncharacterized protein.
    
  0.609
A0A060S339
Uncharacterized protein.
    
  0.584
A0A060SJC8
Uncharacterized protein.
    
  0.575
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.