STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SMR7Carn_acyltransf domain-containing protein. (436 aa)    
Predicted Functional Partners:
A0A060SI17
Uncharacterized protein.
     
 0.838
A0A060S1K8
AMP-binding domain-containing protein.
   
 
 0.820
A0A060SJV7
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
  
 
0.820
A0A060SMJ3
Uncharacterized protein.
     
 0.728
A0A060S8L6
AMP-binding domain-containing protein.
     
 0.596
A0A060S8R5
Uncharacterized protein.
     
 0.596
A0A060S9H4
AMP-binding domain-containing protein.
     
 0.596
A0A060SEK6
Uncharacterized protein.
     
 0.596
A0A060SEN2
AMP-binding domain-containing protein.
     
 0.596
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.