STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SPG5Uncharacterized protein. (1306 aa)    
Predicted Functional Partners:
A0A060SRI2
Glyceraldehyde-3-phosphate dehydrogenase.
     
 0.639
A0A060S7U6
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
  0.611
A0A060SMR1
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.600
A0A060SPG2
Uncharacterized protein.
   
 
 0.596
A0A060SBZ4
Flavoprotein domain-containing protein.
  
 
 0.587
A0A060SQL4
Thymidylat_synt domain-containing protein.
  
 
 0.587
A0A060SG82
NDK domain-containing protein.
     
 0.542
A0A060SJR3
Nucleoside diphosphate kinase.
     
 0.542
A0A060S4P5
Nudix hydrolase domain-containing protein.
    
  0.538
A0A060S9V8
Nudix hydrolase domain-containing protein.
    
  0.538
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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