STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SSU7Uncharacterized protein. (412 aa)    
Predicted Functional Partners:
A0A060S205
Uncharacterized protein.
   
 
 0.638
A0A060SAP3
Cytochrome b5 heme-binding domain-containing protein.
   
 
 0.638
A0A060SP36
Uncharacterized protein.
   
 
 0.638
A0A060SHP9
Uncharacterized protein.
  
 0.625
A0A060SF90
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.465
A0A060SA17
ATP-synt_DE_N domain-containing protein.
    
 0.461
A0A060S5B7
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
  0.453
A0A060SB79
Uncharacterized protein; Belongs to the aldehyde dehydrogenase family.
   
  0.453
A0A060SRT0
Succinate-semialdehyde dehydrogenase.
   
  0.453
A0A060SIT6
Abhydro_lipase domain-containing protein.
    
  0.446
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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