STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SSX1Uncharacterized protein. (408 aa)    
Predicted Functional Partners:
A0A060S4A4
Uncharacterized protein.
   
 0.996
A0A060S447
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.831
A0A060SYS8
Uncharacterized protein.
   
 0.821
A0A060SAD8
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.764
A0A060SP83
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.764
A0A060SLE5
Uncharacterized protein.
   
 0.762
A0A060SKX0
Nuclear pore protein.
   
 0.757
A0A060SDT1
Uncharacterized protein.
   
 0.745
A0A060SQ83
Uncharacterized protein.
   
 0.743
A0A060SMU0
Uncharacterized protein.
    
 0.742
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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