STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SU38AKAP7_NLS domain-containing protein. (219 aa)    
Predicted Functional Partners:
A0A060SN04
Uncharacterized protein.
    
 0.908
A0A060SSQ2
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.899
A0A060SCW2
Uncharacterized protein.
    
   0.897
A0A060SJ25
Rhodanese domain-containing protein.
    
   0.897
A0A060SUJ8
Uncharacterized protein.
    
   0.897
A0A060S3L4
Nudix hydrolase domain-containing protein.
    
   0.896
A0A060S3N0
Ribosomal_L18e/L15P domain-containing protein.
    
   0.896
A0A060SB68
Uncharacterized protein.
    
   0.896
A0A060SED3
L51_S25_CI-B8 domain-containing protein.
    
   0.896
A0A060SEK2
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
    
   0.896
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.