STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SU91Uncharacterized protein. (284 aa)    
Predicted Functional Partners:
A0A060SRW0
Integrase catalytic domain-containing protein.
 
     0.703
A0A060SFG4
WD_REPEATS_REGION domain-containing protein.
    
  0.630
A0A060SZB4
Reverse transcriptase Ty1/copia-type domain-containing protein.
 
     0.605
A0A060SEK8
Integrase catalytic domain-containing protein.
 
     0.576
A0A060T0P2
Reverse transcriptase Ty1/copia-type domain-containing protein.
 
     0.536
A0A060STL7
Reverse transcriptase Ty1/copia-type domain-containing protein.
 
     0.534
A0A060SUW6
Reverse transcriptase Ty1/copia-type domain-containing protein.
 
     0.524
A0A060SUY4
Uncharacterized protein.
 
     0.523
A0A060SSX7
Uncharacterized protein.
  
     0.511
A0A060SRR2
Integrase catalytic domain-containing protein.
 
     0.509
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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