STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SU97Uncharacterized protein. (429 aa)    
Predicted Functional Partners:
A0A060S8Y5
Uncharacterized protein; Belongs to the AAA ATPase family.
    
  0.669
A0A060SB10
ATPase_AAA_core domain-containing protein.
    
  0.669
A0A060SDH0
Uncharacterized protein.
    
  0.669
A0A060ST52
AAA domain-containing protein.
    
  0.669
A0A060ST73
AAA domain-containing protein.
    
  0.669
A0A060SYV7
Uncharacterized protein.
    
  0.669
A0A060SL45
Uncharacterized protein.
   
  0.663
A0A060SS49
Lysine--tRNA ligase.
    
  0.648
A0A060SSF6
Uncharacterized protein.
    
  0.648
A0A060S862
Uncharacterized protein.
    
  0.645
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.