STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SUU9Carbohydrate-Binding Module Family 1 / Glycoside Hydrolase Family 5 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (386 aa)    
Predicted Functional Partners:
A0A060SHA3
Glucanase; Belongs to the glycosyl hydrolase family 6.
 
 
 
0.916
A0A060SA83
Uncharacterized protein.
     
 0.847
A0A060SPL2
Uncharacterized protein.
   
 0.795
A0A060SML7
ABC transporter domain-containing protein.
  
 0.757
A0A060SYW5
Glycoside Hydrolase Family 1 protein; Belongs to the glycosyl hydrolase 1 family.
  
 0.757
A0A060SR05
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
 0.746
A0A060STR5
Glycoside Hydrolase Family 3 protein.
    
 0.746
A0A060SDX7
Glycoside Hydrolase Family 3 protein.
    
 0.710
A0A060SQD5
Glycoside Hydrolase Family 3 protein.
    
 0.710
A0A060SFF3
RING-type domain-containing protein.
    
  0.702
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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